SNP Profiles of POUND 10 /B   View Data

 Show/Hide Profiles

 Key

 1234567891011121314
_Input profile
CCAGCCTTCTAATTGTCTCCAAGGCCAA
1._GC-08-162-4-05
CCAGCCTTCTAATTGTCTCCAAGGCCAA
2._POUND_10_/B
CCAGCCTTCTAATTGTCTCCAAGGCCAA
3._POUND_10_/B
CCAGCCTTCTAATTGTCTCCAAGGCCAA
4._GC-01-115-6-12
CCAGCCTTCTAATTGTCTCCAAGGCCAA
5._GC-01-115-6-12
CCAGCCTTCTAATTGTCTCCAAGGCCAA
6._GC-08-162-4-05
CCAGCCTTCTAATTGTCTCCAAGGCCAA
7._POUND_10_/B
CCAGCCTTCTAATTGTCTCCAAGGCCAA
8._GC-08-162-4-05
CCAGCCTTCTAATTGTCTCCAAGGCCAA
9._GC-08-162-4-05
CCAGCCTTCTAATTGTCTCCAAGGCCAA
10._GC-08-162-4-05
CCAGCCTTCTAATTGTCTCCAAGGCCAA
11._GC-08-162-4-05
CCAGCCTTCTAATTGTCTCCAAGGCCAA
12._GC-08-162-4-05
CCAGCCTTCTAATTGTCTCCAAGGCCAA
13._POUND_10_/B
CCAGCCTTCTAATTGTCTCCAAGGCCAA
14._POUND_10_/B
CCAGCCTTCTAATTGTCTCCAAGGCCAA
15._POUND_10_/B
CCAGCCTTCTAATTGTCTCCAAGGCCAA
16._POUND_10_/B
CCAGCCTTCTAATTGTCTCCAAGGCCAA
17._POUND_10_/B
CCAGCCTTCTAATTGTCTCCAAGGCCAA
18._GC-01-115-6-12
CCAAGGTT__TTTTCCCCAAGGCCGG
19._POUND_10_/B
CCAAGGTT__TTTTCCCCAAGGCCGG
20._GC-01-115-6-12
CCAAGGTTTT_TTTTCCCCAAGGCCGG
21._GC-01-115-6-12
CCAAGGTTTT_TTTTCCCCAAGGCCGG
22._GC-01-115-6-12
CCAAGGTTTT_TTTTCCCCAAGGCCGG
23._GC-08-162-4-05
CCAAGGTTTT_TTTTCCCCAAGGCCGG
24._GC-08-163-4-06
CCAAGGTTTT_TTTTCCCCAAGGCCGG
25._GC-08-163-4-06
CCAAGGTTTT_TTTTCCCCAAGGCCGG
26._POUND_10_/B
CCAAGGTTTT_TTTTCCCCAAGGCCGG
27._POUND_10_/B
CCAAGGTTTT_TTTTCCCCAAGGCCGG
28._POUND_10_/B
CCAAGGTTTT_TTTTCCCCAAGGCCGG
29._POUND_10_/B
CCAAGGTTTT_TTTTCCCCAAGGCCGG
30._POUND_10_/B
CCAAGGTTTT_TTTTCCCCAAGGCCGG
31._POUND_10_/B
CCAAGGTTTT_TTTTCCCCAAGGCCGG
32._POUND_10_/B
CTAGGGCTCTAACCTTCCCTAAAACCAG
33._GC-08-163-4-06
CTAGGGCTCTAACCTTCCCTAAAACCAG
34._RUQ_1618
CCAGGGTTTTCCTTTTCCCCAAGGCCGG
35._POUND_10_/B
CCAAGGTTTTCCTTTTCCCCAAGGCCGG
36._RUQ_1618
_AAGGTT___TT____CCGG
 1516171819202122232425262728
_Input profile
TTAACGCTCTCGGGAACTACGGGGCTAC
1._GC-08-162-4-05
TTAACGCTCTCGGGAACTACGGGGCTAC
2._POUND_10_/B
TTAACGCTCTCGGGAACTACGGGGCTAC
3._POUND_10_/B
TTAACGCTCTCGGGAACTACGGGGCTAC
4._GC-01-115-6-12
TTAACGCTCTCGGGAACTACGGGGCTAC
5._GC-01-115-6-12
TTAACGCTCTCGGGAACTACGGGGCTAC
6._GC-08-162-4-05
TTAACGCTCTCGGGAACTACGGGGCTAC
7._POUND_10_/B
TTAACGCTCTCGGGAACTACGGGGCTAC
8._GC-08-162-4-05
TTAACGCTCTCGGGAACTACGGGGCTAC
9._GC-08-162-4-05
TTAACGCTCTCGGGAACTACGGGGCTAC
10._GC-08-162-4-05
TTAACGCTCTCGGGAACTACGGGGCTAC
11._GC-08-162-4-05
TTAACGCTCTCGGGAACTACGGGGCTAC
12._GC-08-162-4-05
TTAACGCTCTCGGGAACTACGGGGCTAC
13._POUND_10_/B
TTAACGCTCTCGGGAACTACGGGGCTAC
14._POUND_10_/B
TTAACGCTCTCGGGAACTACGGGGCTAC
15._POUND_10_/B
TTAACGCTCTCGGGAACTACGGGGCTAC
16._POUND_10_/B
TTAACGCTCTCGGGAACTACGGGGCTAC
17._POUND_10_/B
TTAACGCTCTCGGGAACTACGGGGCTAC
18._GC-01-115-6-12
TTAAGGTTTTCGGGAACCAAGGTTCCCC
19._POUND_10_/B
TTAAGGTTTTCGGGAACCAAGGTTCCCC
20._GC-01-115-6-12
TTAAGGTTTTCGGGAACCAAGGTTCCCC
21._GC-01-115-6-12
TTAAGGTTTTCGGGAACCAAGGTTCCCC
22._GC-01-115-6-12
TTAAGGTTTTCGGGAACCAAGGTTCCCC
23._GC-08-162-4-05
TTAAGGTTTTCGGGAACCAAGGTTCCCC
24._GC-08-163-4-06
TTAAGGTTTTCGGGAACCAAGGTTCCCC
25._GC-08-163-4-06
TTAAGGTTTTCGGGAACCAAGGTTCCCC
26._POUND_10_/B
TTAAGGTTTTCGGGAACCAAGGTTCCCC
27._POUND_10_/B
TTAAGGTTTTCGGGAACCAAGGTTCCCC
28._POUND_10_/B
TTAAGGTTTTCGGGAACCAAGGTTCCCC
29._POUND_10_/B
TTAAGGTTTTCGGGAACCAAGGTTCCCC
30._POUND_10_/B
TTAAGGTTTTCGGGAACCAAGGTTCCCC
31._POUND_10_/B
TTAAGGTTTTCGGGAACCAAGGTTCCCC
32._POUND_10_/B
CTATCGCTCCCGGGAGTTAACGGTCTCC
33._GC-08-163-4-06
CTATCGCTCCCGGGAGTTAACGGTCTCC
34._RUQ_1618
TTAAGGTTTTCGGGAACCAAGGTTCCCC
35._POUND_10_/B
TTAAGGTTTTCGGGAACCAAGGTTCCCC
36._RUQ_1618
____TTCGGG_CCAAGGTTCCCC
 2930313233343536373839   
_Input profile
AGGGCTAGCCCCCTGTACATGGX_XX_XX_X
1._GC-08-162-4-05
AGGGCTAGCCCCCTGTACATGGX_XX_XX_X
2._POUND_10_/B
AGGGCTAGCCCCCTGTACATGGX_XX_XX_X
3._POUND_10_/B
AGGGCTAGCCCCCTGTACATGGX_XX_XX_X
4._GC-01-115-6-12
AGGGCTAGCCCCCTGTACATGGX_XX_XX_X
5._GC-01-115-6-12
AGGGCTAGCCCCCTGTACATGGX_XX_XX_X
6._GC-08-162-4-05
AGGGCTAGCCCCCTGTACATGGX_XX_XX_X
7._POUND_10_/B
AGGGCTAGCCCCCTGTACATGGX_XX_XX_X
8._GC-08-162-4-05
AGGGCTAGCCCCCTGTACATGGX_XX_XX_X
9._GC-08-162-4-05
AGGGCTAGCCCCCTGTACATGGX_XX_XX_X
10._GC-08-162-4-05
AGGGCTAGCCCCCTGTACATGGX_XX_XX_X
11._GC-08-162-4-05
AGGGCTAGCCCCCTGTACATGGX_XX_XX_X
12._GC-08-162-4-05
AGGGCTAGCCCCCTGTACATGGX_XX_XX_X
13._POUND_10_/B
AGGGCTAGCCCCCTGTACATGGX_XX_XX_X
14._POUND_10_/B
AGGGCTAGCCCCCTGTACATGGX_XX_XX_X
15._POUND_10_/B
AGGGCTAGCCCCCTGTACATGGX_XX_XX_X
16._POUND_10_/B
AGGGCTAGCCCCCTGTACATGGX_XX_XX_X
17._POUND_10_/B
AGGGCTAGCCCCCTGTACATGGX_XX_XX_X
18._GC-01-115-6-12
AAGGCCGGCCAACCGGAATTGGX_XX_XX_X
19._POUND_10_/B
AAGGCCGGCCAACCGGAATTGGX_XX_XX_X
20._GC-01-115-6-12
AAGGCCGGCCAACCGGAATTGGX_XX_XX_X
21._GC-01-115-6-12
AAGGCCGGCCAACCGGAATTGGX_XX_XX_X
22._GC-01-115-6-12
AAGGCCGGCCAACCGGAATTGGX_XX_XX_X
23._GC-08-162-4-05
AAGGCCGGCCAACCGGAATTGGX_XX_XX_X
24._GC-08-163-4-06
AAGGCCGGCCAACCGGAATTGGX_XX_XX_X
25._GC-08-163-4-06
AAGGCCGGCCAACCGGAATTGGX_XX_XX_X
26._POUND_10_/B
AAGGCCGGCCAACCGGAATTGGX_XX_XX_X
27._POUND_10_/B
AAGGCCGGCCAACCGGAATTGGX_XX_XX_X
28._POUND_10_/B
AAGGCCGGCCAACCGGAATTGGX_XX_XX_X
29._POUND_10_/B
AAGGCCGGCCAACCGGAATTGGX_XX_XX_X
30._POUND_10_/B
AAGGCCGGCCAACCGGAATTGGX_XX_XX_X
31._POUND_10_/B
AAGGCCGGCCAACCGGAATTGGX_XX_XX_X
32._POUND_10_/B
AAGGCCAACCACCTGTCCATCGX_XX_XX_X
33._GC-08-163-4-06
AAGGCCAACCACCTGTCCATCGX_XX_XX_X
34._RUQ_1618
AAGGCCGGCCAACCGGAATTGGX_XX_XX_X
35._POUND_10_/B
AAGGCCGGCCAACCGGAATTGGX_XX_XX_X
36._RUQ_1618
AA_CCGGCCAACCGGAA__X_XX_XX_X

Input profile: POUND_10_/B

 
 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8405 11
 Dapeng Zhang, 2016

1._POUND_10_/B GC-08-162-4-05

identical
39 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 4
Notes: 4
 Mars, 2018

2._POUND_10_/B

identical
39 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8405 8
 Dapeng Zhang, 2016

3._POUND_10_/B

identical
39 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8405 10
 Dapeng Zhang, 2016

4._POUND_10_/B GC-01-115-6-12

identical
39 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 2
Notes: 2 > FP1
 Mars, 2018

5._POUND_10_/B GC-01-115-6-12

identical
39 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 10
Notes: 10
 Mars, 2018

6._POUND_10_/B GC-08-162-4-05

identical
39 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 2
Notes: 2
 Mars, 2018

7._POUND_10_/B

identical
39 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8405 6
 Dapeng Zhang, 2016

8._POUND_10_/B GC-08-162-4-05

identical
39 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 5
Notes: 5
 Mars, 2018

9._POUND_10_/B GC-08-162-4-05

identical
39 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 6
Notes: 6
 Mars, 2018

10._POUND_10_/B GC-08-162-4-05

identical
39 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 8
Notes: 8
 Mars, 2018

11._POUND_10_/B GC-08-162-4-05

identical
39 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 10
Notes: 10
 Mars, 2018

12._POUND_10_/B GC-08-162-4-05

identical
39 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 11
Notes: 11
 Mars, 2018

13._POUND_10_/B

identical
39 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8405 5
 Dapeng Zhang, 2016

14._POUND_10_/B

identical
39 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 1612 10
 Dapeng Zhang, 2016

15._POUND_10_/B

identical
39 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 1612 2 > FP
 Dapeng Zhang, 2016

16._POUND_10_/B

identical
39 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8405 2
 Dapeng Zhang, 2016

17._POUND_10_/B

identical
39 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8405 4
 Dapeng Zhang, 2016

18._POUND_10_/B GC-01-115-6-12

66.2 %
37 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 9
Notes: 9
 Mars, 2018

19._POUND_10_/B

66.2 %
37 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 1612 9
 Dapeng Zhang, 2016
Population Assignment: 
View Data
 Dapeng Zhang, 2016

20._POUND_10_/B GC-01-115-6-12

65.8 %
38 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 1
Notes: 1 > FP2
 Mars, 2018

21._POUND_10_/B GC-01-115-6-12

65.8 %
38 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 3
Notes: 3 > FP4
 Mars, 2018

22._POUND_10_/B GC-01-115-6-12

65.8 %
38 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 11
Notes: 11 > FP3
 Mars, 2018

23._POUND_10_/B GC-08-162-4-05

65.8 %
38 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 7
Notes: 7
 Mars, 2018

24._POUND_10_/B GC-08-163-4-06

65.8 %
38 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 2
Notes: 2
 Mars, 2018

25._POUND_10_/B GC-08-163-4-06

65.8 %
38 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 10
Notes: 10
 Mars, 2018

26._POUND_10_/B

65.8 %
38 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 1612 1 > FP
 Dapeng Zhang, 2016

27._POUND_10_/B

65.8 %
38 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 1612 11 > F
 Dapeng Zhang, 2016

28._POUND_10_/B

65.8 %
38 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 1612 3 > FP
 Dapeng Zhang, 2016

29._POUND_10_/B

65.8 %
38 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8405 7
 Dapeng Zhang, 2016

30._POUND_10_/B

65.8 %
38 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8406 2
 Dapeng Zhang, 2016

31._POUND_10_/B

65.8 %
38 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8406 10
 Dapeng Zhang, 2016

32._POUND_10_/B

65.4 %
39 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8406 7
 Dapeng Zhang, 2016

33._POUND_10_/B GC-08-163-4-06

65.4 %
39 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 7
Notes: 7
 Mars, 2018

34._POUND_10_/B RUQ_1618

65.4 %
39 shared markers

 View  View all  Clone  Any
International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Dapeng Zhang, 2016

35._POUND_10_/B

64.1 %
39 shared markers

 View  View all  Clone  Any
International Cocoa Genebank, Trinidad (ICG,T), Trinidad and Tobago
Location: 6B F429 T13
 Dapeng Zhang, 2016

36._POUND_10_/B RUQ_1618

54.3 %
23 shared markers

 View  View all  Clone  Any
International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Dapeng Zhang, 2014

 

  Key to SNP Markers

1TcSNP1520 2TcSNP1484 3TcSNP1458 4TcSNP1442 5TcSNP1414
6TcSNP1350 7TcSNP1270 8TcSNP1253 9TcSNP1165 10TcSNP1144
11TcSNP1075 12TcSNP1062 13TcSNP1060 14TcSNP998 15TcSNP994
16TcSNP953 17TcSNP929 18TcSNP917 19TcSNP891 20TcSNP872
21TcSNP723 22TcSNP645 23TcSNP619 24TcSNP591 25TcSNP577
26TcSNP560 27TcSNP534 28TcSNP529 29TcSNP469 30TcSNP429
31TcSNP242 32TcSNP230 33TcSNP226 34TcSNP193 35TcSNP151
36TcSNP150 37TcSNP144 38TcSNP32 39TcSNP25